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rrefine - r Client for OpenRefine API

'OpenRefine' (formerly 'Google Refine') is a popular, open source data cleaning software. This package enables users to programmatically trigger data transfer between R and 'OpenRefine'. Available functionality includes project import, export and deletion.

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5.84 score 23 stars 30 scripts 436 downloads

rplanes - Plausibility Analysis of Epidemiological Signals

Provides functionality to prepare data and analyze plausibility of both forecasted and reported epidemiological signals. The functions implement a set of plausibility algorithms that are agnostic to geographic and time resolutions and are calculated independently then presented as a combined score.

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5.78 score 10 stars 7 scripts 177 downloads

pracpac - Practical 'R' Packaging in 'Docker'

Streamline the creation of 'Docker' images with 'R' packages and dependencies embedded. The 'pracpac' package provides a 'usethis'-like interface to creating Dockerfiles with dependencies managed by 'renv'. The 'pracpac' functionality is described in Nagraj and Turner (2023) <doi:10.48550/arXiv.2303.07876>.

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5.60 score 40 stars 8 scripts 707 downloads

skater - Utilities for SNP-Based Kinship Analysis

Utilities for single nucleotide polymorphism (SNP) based kinship analysis testing and evaluation. The 'skater' package contains functions for importing, parsing, and analyzing pedigree data, performing relationship degree inference, benchmarking relationship degree classification, and summarizing identity by descent (IBD) segment data. Package functions and methods are described in Turner et al. (2021) "skater: An R package for SNP-based Kinship Analysis, Testing, and Evaluation" <doi:10.1101/2021.07.21.453083>.

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5.40 score 10 stars 8 scripts 542 downloads

twoxtwo - Work with Two-by-Two Tables

A collection of functions for data analysis with two-by-two contingency tables. The package provides tools to compute measures of effect (odds ratio, risk ratio, and risk difference), calculate impact numbers and attributable fractions, and perform hypothesis testing. Statistical analysis methods are oriented towards epidemiological investigation of relationships between exposures and outcomes.

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4.81 score 2 stars 16 scripts 153 downloads

ctrlvee - Extract External 'R' Code and Insert Inline

An 'RStudio' and 'Positron' add-in that prompts the user for a web 'URL', fetches the page content, extracts 'R' code chunks, and inserts those code chunks into the active editor at the current cursor position. Supports extraction of raw 'Markdown' or 'Quarto' source files, 'GitHub' Gist and rendered 'HTML' pages that have markup elements with 'R'-related classes.

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4.78 score 4 stars 2 scripts 629 downloads

acroname - Engine for Acronyms and Initialisms

A tool for generating acronyms and initialisms from arbitrary text input.

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2.70 score 1 stars 3 scripts 217 downloads